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2021 (1)
Modeling as Scientific Reasoning—The Role of Abductive Reasoning for Modeling Competence. Upmeier zu Belzen, A.; Engelschalt, P.; and Krüger, D. Education Sciences, 11(9): 495. 2021.
doi link bibtex
doi link bibtex
@article{upmeier_zu_belzen_modeling_2021, title = {Modeling as {Scientific} {Reasoning}—{The} {Role} of {Abductive} {Reasoning} for {Modeling} {Competence}}, volume = {11}, doi = {10.3390/educsci11090495}, number = {9}, journal = {Education Sciences}, author = {Upmeier zu Belzen, Annette and Engelschalt, Paul and Krüger, Dirk}, year = {2021}, pages = {495}, }
2010 (1)
Teaching Bioinformatics and Neuroinformatics by Using Free Web-based Tools. Grisham, W.; Schottler, N. A.; Valli-Marill, J.; Beck, L.; and Beatty, J. CBE—Life Sciences Education, 9(2): 98–107. June 2010.
Paper doi link bibtex abstract
@article{grisham_teaching_2010, title = {Teaching {Bioinformatics} and {Neuroinformatics} by {Using} {Free} {Web}-based {Tools}}, volume = {9}, issn = {1931-7913}, url = {https://www.lifescied.org/doi/10.1187/cbe.09-11-0079}, doi = {10.1187/cbe.09-11-0079}, abstract = {This completely computer-based module's purpose is to introduce students to bioinformatics resources. We present an easy-to-adopt module that weaves together several important bioinformatic tools so students can grasp how these tools are used in answering research questions. Students integrate information gathered from websites dealing with anatomy (Mouse Brain Library), quantitative trait locus analysis (WebQTL from GeneNetwork), bioinformatics and gene expression analyses (University of California, Santa Cruz Genome Browser, National Center for Biotechnology Information's Entrez Gene, and the Allen Brain Atlas), and information resources (PubMed). Instructors can use these various websites in concert to teach genetics from the phenotypic level to the molecular level, aspects of neuroanatomy and histology, statistics, quantitative trait locus analysis, and molecular biology (including in situ hybridization and microarray analysis), and to introduce bioinformatic resources. Students use these resources to discover 1) the region(s) of chromosome(s) influencing the phenotypic trait, 2) a list of candidate genes—narrowed by expression data, 3) the in situ pattern of a given gene in the region of interest, 4) the nucleotide sequence of the candidate gene, and 5) articles describing the gene. Teaching materials such as a detailed student/instructor's manual, PowerPoints, sample exams, and links to free Web resources can be found at http://mdcune.psych.ucla.edu/modules/bioinformatics .}, language = {en}, number = {2}, urldate = {2022-08-02}, journal = {CBE—Life Sciences Education}, author = {Grisham, William and Schottler, Natalie A. and Valli-Marill, Joanne and Beck, Lisa and Beatty, Jackson}, editor = {Ledbetter, Mary Lee}, month = jun, year = {2010}, pages = {98--107}, }
This completely computer-based module's purpose is to introduce students to bioinformatics resources. We present an easy-to-adopt module that weaves together several important bioinformatic tools so students can grasp how these tools are used in answering research questions. Students integrate information gathered from websites dealing with anatomy (Mouse Brain Library), quantitative trait locus analysis (WebQTL from GeneNetwork), bioinformatics and gene expression analyses (University of California, Santa Cruz Genome Browser, National Center for Biotechnology Information's Entrez Gene, and the Allen Brain Atlas), and information resources (PubMed). Instructors can use these various websites in concert to teach genetics from the phenotypic level to the molecular level, aspects of neuroanatomy and histology, statistics, quantitative trait locus analysis, and molecular biology (including in situ hybridization and microarray analysis), and to introduce bioinformatic resources. Students use these resources to discover 1) the region(s) of chromosome(s) influencing the phenotypic trait, 2) a list of candidate genes—narrowed by expression data, 3) the in situ pattern of a given gene in the region of interest, 4) the nucleotide sequence of the candidate gene, and 5) articles describing the gene. Teaching materials such as a detailed student/instructor's manual, PowerPoints, sample exams, and links to free Web resources can be found at http://mdcune.psych.ucla.edu/modules/bioinformatics .
undefined (5)
How Software in the Life Sciences Actually Works (And Doesn’t Work).
Paper link bibtex abstract
@misc{noauthor_how_nodate, title = {How {Software} in the {Life} {Sciences} {Actually} {Works} ({And} {Doesn}’t {Work})}, url = {https://newscience.org/how-software-in-the-life-sciences-actually-works-and-doesnt-work/}, abstract = {By Elliot Hershberg. Published 2022-01-30. Elliot is a PhD student at Stanford University. Before graduate school, he worked on a range of problems in biotechnology. He has helped design cancer vaccines, built computational tools for advancing imaging technologies, and worked as a software engineer on a modern genome browser. Elliot also writes a weekly newsletter called The Century of Biology. Genomics is projected to require up to 110 petabytes (PB) of storage a day within the next decade—for …}, language = {en}, urldate = {2022-12-31}, journal = {New Science}, }
By Elliot Hershberg. Published 2022-01-30. Elliot is a PhD student at Stanford University. Before graduate school, he worked on a range of problems in biotechnology. He has helped design cancer vaccines, built computational tools for advancing imaging technologies, and worked as a software engineer on a modern genome browser. Elliot also writes a weekly newsletter called The Century of Biology. Genomics is projected to require up to 110 petabytes (PB) of storage a day within the next decade—for …
The Explorer's Guide to Biology.
Paper link bibtex abstract
@misc{noauthor_explorers_nodate, title = {The {Explorer}'s {Guide} to {Biology}}, url = {https://explorebiology.org/}, abstract = {Learning biology should be mesmerizing, not just memorizing. And it should be free-of-charge. Departing from traditional college textbooks, XBio presents biology as detective work and focuses on the process of science.}, language = {en}, urldate = {2022-06-13}, }
Learning biology should be mesmerizing, not just memorizing. And it should be free-of-charge. Departing from traditional college textbooks, XBio presents biology as detective work and focuses on the process of science.
PrecisionFDA Challenges.
Paper link bibtex
@misc{noauthor_precisionfda_nodate, title = {{PrecisionFDA} {Challenges}}, url = {https://precision.fda.gov/news}, urldate = {2022-05-01}, }
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